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Draft:Carolyn Napoli

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Carolyn Napoli is an Emerita Research Professor, University of Arizona. In 1990 she co-discovered the mechanism of co-suppression.[1], gene silencing which, like transposon silencing, was first discovered in plants.

Early Life and education

Napoli was born Carolyn Ann Cole in Harlingen, Texas on April 29,1946. At the University of Florida she received a scholarship to pursue a Bachelors of Sciences degree in microbiology which she obtained with honors in 1972. While still an undergraduate, she secured a position in David H. Hubbell’s laboratory in the Soil Sciences Department.

Research and career

Continuing in the Hubbell lab, Napoli pursued her PhD research investigating the process of infection of Trifolium (clover) roots by the soil bacterium, Rhizobium trifolii. Using electron microscopy, she demonstrated, for the first time, the development of infection threads within root hairs[2].

Supported by an National Science Foundation (NSF) postdoctoral fellowship, Napoli continued her Rhizobium research in the laboratory of Peter Albersheim[3] at the University of Colorado Boulder later joining the lab of Larry Gold in the Department of Molecular, Cellular and Developmental Biology[4].

Transitioning from academia, Napoli accepted a position at the International Plant Research Institute (IPRI) in San Carlos, California, where she met Brian Staskawicz. When Staskawicz subsequently assumed a faculty position at the University of California, Berkeley, he offered Napoli a position in his new lab[5], working on plant avirulence genes[6]

In Berkeley, Napoli met Richard A. Jorgensen, who was working in Oakland at the agricultural biotechnology company Advanced Genetic Sciences, Inc. (AGS) which was acquired later by DNA Plant Technology Corporation. Together at AGS, they established a program to engineer floriculture crops. With a goal of increasing flower pigmentation by overexpressing the gene encoding the Chalcone Synthase (CHS) they deployed a vector for high-level translation designed by their AGS colleague Jonathan Jones. The antisense CHS construct created a completely different color distribution effect with irregular, lighter petal pigmentation. One of these patterns, dubbed “Cossack Dancer,”[7] was featured in The Plant Cell 30-year retrospective, "Refections on Plant Cell Classics,". Napoli and Jorgensen had identified a mechanism they coined “co-suppression.”[1]. Their confirmation of a post transcriptional gene silencing predated the discovery of RNA interference (RNAi) and contributed to the current understanding of RNA-mediated gene silencing in eukaryotes.

From DNAP, Napoli accepted a faculty position in the Department of Environmental Horticulture at the University of California, Davis (UCD). At UCD, Napoli deployed ethyl methanesulfonate (EMS) strategy to produce mutations in both petunia and Arabidopsis seeds. By screening over 1,200 mutants in petunia she identified a certain bushy phenotype that she termed "decreased apical dominance" or "dad" mutants and subsequently published her analysis in the journal Plant Physiology[8] of the reversal of this phenomenon by grafting. In a subsequent collaboration with Loverine Taylor, Napoli identified a phenotype that was used as a selectable marker for plant breeding research[9].

Following UCD, Napoli joined the Department of Plant Sciences at the University of Arizona (UA) where she focused on designing and distributing resources to the Arabidopsis and maize research communities under the auspices of an NSF Plant Genome Research Program grant led by Jorgensen and Vicki Chandler. At UA, Napoli launched the NSF-funded ChromDB (Chromatin Database)[10], a platform for displaying chromatin-associated proteins, including RNAi-associated proteins, for a range of organisms. ChromDB provided high school teachers with hands-on bioinformatics and functional genomics experiences.

Awards and honors

In 2023 Napoli was recognized as a Pioneer Member of the American Society of Plant Biologists.

References[edit]

  1. ^ a b Napoli, C.; Lemieux, C.; Jorgensen, R. (1990-04-01). "Introduction of a Chimeric Chalcone Synthase Gene into Petunia Results in Reversible Co-Suppression of Homologous Genes in trans". The Plant Cell. 2 (4): 279–289. doi:10.1105/tpc.2.4.279. ISSN 1040-4651. PMC 159885. PMID 12354959.
  2. ^ Napoli, C A; Hubbell, D H (1975). "Ultrastructure of Rhizobium-induced infection threads in clover root hairs". Applied Microbiology. 30 (6): 1003–1009. doi:10.1128/am.30.6.1003-1009.1975. ISSN 0003-6919. PMC 376582. PMID 1211931.
  3. ^ "Peter Albersheim". Glycobiology. 28 (10): 714–718. 2018-10-01. doi:10.1093/glycob/cwy066. ISSN 1460-2423.
  4. ^ "Larry Gold". Molecular, Cellular & Developmental Biology. 2016-09-22. Retrieved 2024-05-18.
  5. ^ "Staskawicz Lab". Staskawicz Lab. Retrieved 2024-05-18.
  6. ^ Bonas, Ulla (1998-01-01), Williams, Peter; Ketley, Julian; Salmond, George (eds.), "5.4 Avirulence Genes", Methods in Microbiology, Bacterial Pathogenesis, vol. 27, Academic Press, pp. 149–155, doi:10.1016/s0580-9517(08)70278-2, ISBN 978-0-12-521525-1, retrieved 2024-05-18
  7. ^ Scheid, Ortrun Mittelsten (12 June 2019). "Illuminating (White and) Purple Patches". The Plant Cell. 31 (6): 1208–1209. doi:10.1105/tpc.19.00308. ISSN 1040-4651. PMC 6588294. PMID 31036597.
  8. ^ Napoli, Carolyn (1996). "Highly Branched Phenotype of the Petunia dadl-7 Mutant 1s Reversed by Grafting". academic.oup.com. Retrieved 2024-05-18.
  9. ^ Napoli, Carolyn A.; Fahy, Deirdre; Wang, Huai-Yu; Taylor, Loverine P. (1999-06-01). "white anther : A Petunia Mutant That Abolishes Pollen Flavonol Accumulation, Induces Male Sterility, and Is Complemented by a Chalcone Synthase Transgene1". Plant Physiology. 120 (2): 615–622. doi:10.1104/pp.120.2.615. ISSN 1532-2548. PMC 59301. PMID 10364414.
  10. ^ Gendler, Karla; Paulsen, Tara; Napoli, Carolyn (2008-01-01). "ChromDB: The Chromatin Database". Nucleic Acids Research. 36 (suppl_1): D298–D302. doi:10.1093/nar/gkm768. ISSN 0305-1048. PMC 2238968. PMID 17942414.